Multimodal artificial intelligence-based pathogenomics improves survival prediction in oral squamous cell carcinoma … – Nature.com
Sung, H. et al. Global cancer statistics 2020: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 Countries. CA Cancer J. Clin. 71, 209249 (2021).
Article PubMed Google Scholar
Chen, S.-H., Hsiao, S.-Y., Chang, K.-Y. & Chang, J.-Y. New insights into oral squamous cell carcinoma: From clinical aspects to molecular tumorigenesis. Int J. Mol. Sci. 22, 2252 (2021).
Article CAS PubMed Central PubMed Google Scholar
Adrien, J., Bertolus, C., Gambotti, L., Mallet, A. & Baujat, B. Why are head and neck squamous cell carcinoma diagnosed so late? Influence of health care disparities and socio-economic factors. Oral Oncol. 50, 9097 (2014).
Article CAS PubMed Google Scholar
Gonzlez-Moles, M. ., Aguilar-Ruiz, M. & Ramos-Garca, P. Challenges in the early diagnosis of oral cancer, evidence gaps and strategies for improvement: A scoping review of systematic reviews. Cancers 14, 4967 (2022).
Article PubMed Central PubMed Google Scholar
Russo, D. et al. Development and validation of prognostic models for oral squamous cell carcinoma: A systematic review and appraisal of the literature. Cancers 13, 5755 (2021).
Article PubMed Central PubMed Google Scholar
Carreras-Torras, C. & Gay-Escoda, C. Techniques for early diagnosis of oral squamous cell carcinoma: Systematic review. Med. Oral. Patol. Oral. Cir. Bucal. 20, e305-315 (2015).
Article PubMed Central PubMed Google Scholar
Alabi, R. O. et al. Machine learning in oral squamous cell carcinoma: Current status, clinical concerns and prospects for future-A systematic review. Artif. Intell. Med. 115, 102060 (2021).
Article PubMed Google Scholar
Qiu L, Khormali A, & Liu K. Deep Biological Pathway Informed Pathology-Genomic Multimodal Survival Prediction. (2023) [cited 2023 Apr 3]; https://arxiv.org/abs/2301.02383
Vale-Silva, L. A. & Rohr, K. Long-term cancer survival prediction using multimodal deep learning. Sci. Rep. 11, 13505 (2021).
Article CAS PubMed Central ADS PubMed Google Scholar
Carrillo-Perez, F. et al. Machine-learning-based late fusion on multi-omics and multi-scale data for non-small-cell lung cancer diagnosis. JPM 12, 601 (2022).
Article PubMed Central PubMed Google Scholar
Lipkova, J. et al. Artificial intelligence for multimodal data integration in oncology. Cancer Cell. 40, 10951110 (2022).
Article CAS PubMed Central PubMed Google Scholar
Steyaert, S. et al. Multimodal deep learning to predict prognosis in adult and pediatric brain tumors. Commun. Med. 3, 44 (2023).
Article PubMed Central PubMed Google Scholar
Saravi, B. et al. Artificial intelligence-driven prediction modeling and decision making in spine surgery using hybrid machine learning models. J. Personal. Med. 12, 509 (2022).
Article Google Scholar
Zuley, M.L., Jarosz, R., Kirk, S., Lee, Y., Colen, R., & Garcia, K., et al. The Cancer Genome Atlas Head-Neck Squamous Cell Carcinoma Collection (TCGA-HNSC), The Cancer Imaging Archive, 2016 (Accessed 3 Apr 2023); https://wiki.cancerimagingarchive.net/x/VYG0
Li, X. et al. Multi-omics analysis reveals prognostic and therapeutic value of cuproptosis-related lncRNAs in oral squamous cell carcinoma. Front. Genet. 13, 984911 (2022).
Article CAS PubMed Central PubMed Google Scholar
Zou, C. et al. Identification of immune-related risk signatures for the prognostic prediction in oral squamous cell carcinoma. J. Immunol. Res. 2021, 6203759 (2021).
Article PubMed Central PubMed Google Scholar
Macenko, M., Niethammer, M., Marron, J.S., Borland, D., Woosley, J.T., Xiaojun, G., et al. A method for normalizing histology slides for quantitative analysis. In 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2009 (IEEE, accessed 4 Apr 2023]. P. 11071110. http://ieeexplore.ieee.org/document/5193250/
Vahadane, A. et al. Structure-preserving color normalization and sparse stain separation for histological images. IEEE Trans. Med. Imaging 35, 19621971 (2016).
Article PubMed Google Scholar
Salvi, M., Acharya, U. R., Molinari, F. & Meiburger, K. M. The impact of pre- and post-image processing techniques on deep learning frameworks: A comprehensive review for digital pathology image analysis. Comput. Biol. Med. 128, 104129 (2021).
Article PubMed Google Scholar
Carpenter, A. E. et al. Cell Profiler: Image analysis software for identifying and quantifying cell phenotypes. Genome Biol. 7, R100 (2006).
Article PubMed Central PubMed Google Scholar
Hughey, J. J. & Butte, A. J. Robust meta-analysis of gene expression using the elastic net. Nucleic Acids Res. 43, e79 (2015).
Article PubMed Central PubMed Google Scholar
Tschodu, D. et al. Re-evaluation of publicly available gene-expression databases using machine-learning yields a maximum prognostic power in breast cancer. Sci. Rep. 13, 16402 (2023).
Article CAS PubMed Central ADS PubMed Google Scholar
Kanehisa, M. & Goto, S. KEGG: Kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 28, 2730 (2000).
Article CAS PubMed Central PubMed Google Scholar
Kanehisa, M. Toward understanding the origin and evolution of cellular organisms. Protein Sci. 28, 19471951 (2019).
Article CAS PubMed Central PubMed Google Scholar
Kanehisa, M., Furumichi, M., Sato, Y., Kawashima, M. & Ishiguro-Watanabe, M. KEGG for taxonomy-based analysis of pathways and genomes. Nucleic Acids Res. 51, D587D592 (2023).
Article CAS PubMed Google Scholar
Ye, H. et al. Metabolism-related bioinformatics analysis reveals that HPRT1 facilitates the progression of oral squamous cell carcinoma in vitro. J. Oncol. 2022, 116 (2022).
Google Scholar
Ferreira, A.-K. et al. Survival and prognostic factors in patients with oral squamous cell carcinoma. Med. Oral. Patol. Oral. Cir. Bucal. 26, e387e392 (2021).
Article PubMed Google Scholar
Asio, J., Kamulegeya, A. & Banura, C. Survival and associated factors among patients with oral squamous cell carcinoma (OSCC) in Mulago hospital, Kampala, Uganda. Cancers Head Neck. 3, 9 (2018).
Article PubMed Central PubMed Google Scholar
Girod, A., Mosseri, V., Jouffroy, T., Point, D. & Rodriguez, J. Women and squamous cell carcinomas of the oral cavity and oropharynx: Is there something new?. J. Oral Maxillof. Surg. 67, 19141920 (2009).
Article Google Scholar
Wong, K., Rostomily, R. & Wong, S. Prognostic gene discovery in glioblastoma patients using deep learning. Cancers 11, 53 (2019).
Article CAS PubMed Central PubMed Google Scholar
Hsich, E., Gorodeski, E. Z., Blackstone, E. H., Ishwaran, H. & Lauer, M. S. Identifying important risk factors for survival in patient with systolic heart failure using random survival forests. Circ. Cardiovasc. Qual. Outcomes 4, 3945 (2011).
Article PubMed Google Scholar
Ishwaran, H., Kogalur, U. B., Gorodeski, E. Z., Minn, A. J. & Lauer, M. S. High-dimensional variable selection for survival data. J. Am. Stat. Assoc. 105, 20517 (2010).
Article MathSciNet CAS Google Scholar
Ishwaran, H., Kogalur, U. B., Chen, X. & Minn, A. J. Random survival forests for high-dimensional data. Stat. Anal. Data Min. ASA Data Sci. J. 2011(4), 11532 (2011).
Article MathSciNet Google Scholar
Katzman, J. L. et al. Deepsurv: personalized treatment recommender system using a cox proportional hazards deep neural network. BMC Med. Res. Methol. 18, 187202 (2018).
Google Scholar
Sargent, D. J. Comparison of artificial neural networks with other statistical approaches. Cancer 91, 16361642 (2001).
Article CAS PubMed Google Scholar
Xiang, A., Lapuerta, P., Ryutov, A., Buckley, J. & Azen, S. Comparison of the performance of neural network methods and Cox regression for censored survival data. Comput. Stat. Data Anal. 34, 24357 (2000).
Article Google Scholar
Nie, Z., Zhao, P., Shang, Y. & Sun, B. Nomograms to predict the prognosis in locally advanced oral squamous cell carcinoma after curative resection. BMC Cancer 21, 372 (2021).
Article PubMed Central PubMed Google Scholar
Nojavanasghari, B., Gopinath, D., Koushik, J., Baltruaitis, T., & Morency, L. P. Deep multimodal fusion for persuasiveness prediction. In Proceedings of the 18th ACM International Conference on Multimodal Interaction. 284288 (2016).
Kampman, O., Barezi, E. J., Bertero, D., & Fung, P. Investigating audio, video, and text fusion methods for end-to-end automatic personality prediction. In Proceedings of the 56th Annual Meeting of the Association for Computational Linguistics vol. 2.606611 (2018).
Wang, Z., Li, R., Wang, M. & Li, A. Gpdbn: Deep bilinear network integrating both genomic data and pathological images for breast cancer prognosis prediction. Bioinformatics 27, 29632970 (2021).
Article Google Scholar
Subramanian, V., Syeda-Mahmood, T., & Do, M. N. Multimodal fusion using sparse cca for breast cancer survival prediction. In Proceedings of IEEE 18th International Symposium on Biomedical Imaging (ISBI).14291432 (2021).
Mai, S., Hu, H., & Xing, S. Modality to modality translation: An adversarial representation learning and graph fusion network for multimodal fusion. In Proceedings of the AAAI Conference on Artificial Intelligence 164172 (2020).
Mobadersany, P. et al. Predicting cancer outcomes from histology and genomics. Predicting cancer outcomes from histology and genomics using convolutional networks. Proc. Natl. Acad. Sci. 115, 29702979 (2018).
Article ADS Google Scholar
Wang, C. et al. A cancer survival prediction method based on graph convolutional network. IEEE Trans. Nanobiosci. 19, 117126 (2020).
Article Google Scholar
Zadeh, A., Chen, M., Poria, S., Cambria, E., & Morency, L. P Tensor fusion network for multimodal sentiment analysis. In Proceedings of the 2017 Conference on Empirical Methods in Natural Language Processing, 11031114 (2017).
Chen, R. J. et al. Pathomic fusion: An integrated framework for fusing histopathology and genomic features for cancer diagnosis and prognosis. IEEE Trans. Med. Imaging 41, 757770 (2022).
Article PubMed Central PubMed Google Scholar
Kim, J. H., On, K. W., Lim, W., Kim, J., Ha, J. W., & Zhang, B. T. Hadamard product for low-rank bilinear pooling. In Proceedings of International Conference on Learning Representations, 114 (2017)
Liu, Z., Shen, Y., Lakshminarasimhan, V. B., Liang, P. P., Zadeh, A., & Morency, L. P. Efficient low-rank multimodal fusion with modality-specific factors. In Proceedings of the 56th Annual Meeting of the Association for Computational Linguistics. 22472256 (2021)
Li, R., Wu, X., Li, A. & Wang, M. Hfbsurv: Hierarchical multimodal fusion with factorized bilinear models for cancer survival prediction. Bioinformatics 38, 25872594 (2022).
Article CAS PubMed Central PubMed Google Scholar
Original post:
Multimodal artificial intelligence-based pathogenomics improves survival prediction in oral squamous cell carcinoma ... - Nature.com
- Machine learning can help blood tests have a separate normal for each patient - The Hindu - January 1st, 2025 [January 1st, 2025]
- Artificial Intelligence and Machine Learning Programs Introduced this Spring - The Flash Today - January 1st, 2025 [January 1st, 2025]
- Virtual reality-assisted prediction of adult ADHD based on eye tracking, EEG, actigraphy and behavioral indices: a machine learning analysis of... - January 1st, 2025 [January 1st, 2025]
- Open source machine learning systems are highly vulnerable to security threats - TechRadar - December 22nd, 2024 [December 22nd, 2024]
- After the PS5 Pro's less dramatic changes, PlayStation architect Mark Cerny says the next-gen will focus more on CPUs, memory, and machine-learning -... - December 22nd, 2024 [December 22nd, 2024]
- Accelerating LLM Inference on NVIDIA GPUs with ReDrafter - Apple Machine Learning Research - December 22nd, 2024 [December 22nd, 2024]
- Machine learning for the prediction of mortality in patients with sepsis-associated acute kidney injury: a systematic review and meta-analysis - BMC... - December 22nd, 2024 [December 22nd, 2024]
- Machine learning uncovers three osteosarcoma subtypes for targeted treatment - Medical Xpress - December 22nd, 2024 [December 22nd, 2024]
- From Miniatures to Machine Learning: Crafting the VFX of Alien: Romulus - Animation World Network - December 22nd, 2024 [December 22nd, 2024]
- Identification of hub genes, diagnostic model, and immune infiltration in preeclampsia by integrated bioinformatics analysis and machine learning -... - December 22nd, 2024 [December 22nd, 2024]
- This AI Paper from Microsoft and Novartis Introduces Chimera: A Machine Learning Framework for Accurate and Scalable Retrosynthesis Prediction -... - December 18th, 2024 [December 18th, 2024]
- Benefits and Challenges of Integrating AI and Machine Learning into EHR Systems - Healthcare IT Today - December 18th, 2024 [December 18th, 2024]
- The History Of AI: How Machine Learning's Evolution Is Reshaping Everything Around Us - SlashGear - December 18th, 2024 [December 18th, 2024]
- AI and Machine Learning to Enhance Pension Plan Governance and the Investor Experience: New CFA Institute Research - Fintech Finance - December 18th, 2024 [December 18th, 2024]
- Address Common Machine Learning Challenges With Managed MLflow - The New Stack - December 18th, 2024 [December 18th, 2024]
- Machine Learning Used To Classify Fossils Of Extinct Pollen - Offworld Astrobiology Applications? - Astrobiology News - December 18th, 2024 [December 18th, 2024]
- Machine learning model predicts CDK4/6 inhibitor effectiveness in metastatic breast cancer - News-Medical.Net - December 18th, 2024 [December 18th, 2024]
- New Lockheed Martin Subsidiary to Offer Machine Learning Tools to Defense Customers - ExecutiveBiz - December 18th, 2024 [December 18th, 2024]
- How Powerful Will AI and Machine Learning Become? - International Policy Digest - December 18th, 2024 [December 18th, 2024]
- ChatGPT-Assisted Machine Learning for Chronic Disease Classification and Prediction: A Developmental and Validation Study - Cureus - December 18th, 2024 [December 18th, 2024]
- Blood Tests Are Far From Perfect But Machine Learning Could Change That - Inverse - December 18th, 2024 [December 18th, 2024]
- Amazons AGI boss: You dont need a PhD in machine learning to build with AI anymore - Fortune - December 18th, 2024 [December 18th, 2024]
- From Novice to Pro: A Roadmap for Your Machine Learning Career - KDnuggets - December 10th, 2024 [December 10th, 2024]
- Dimension nabs $500M second fund for 'still contrary' intersection of bio and machine learning - Endpoints News - December 10th, 2024 [December 10th, 2024]
- Using Machine Learning to Make A Really Big Detailed Simulation - Astrobites - December 10th, 2024 [December 10th, 2024]
- Driving Business Growth with GreenTomatos Data and Machine Learning Strategy on Generative AI - AWS Blog - December 10th, 2024 [December 10th, 2024]
- Unlocking the power of data analytics and machine learning to drive business performance - WTW - December 10th, 2024 [December 10th, 2024]
- AI and the Ethics of Machine Learning | by Abwahabanjum | Dec, 2024 - Medium - December 10th, 2024 [December 10th, 2024]
- Differentiating Cystic Lesions in the Sellar Region of the Brain Using Artificial Intelligence and Machine Learning for Early Diagnosis: A Prospective... - December 10th, 2024 [December 10th, 2024]
- New Amazon SageMaker AI Innovations Reimagine How Customers Build and Scale Generative AI and Machine Learning Models - Amazon Press Release - December 10th, 2024 [December 10th, 2024]
- What is Machine Learning? 18 Crucial Concepts in AI, ML, and LLMs - Netguru - December 5th, 2024 [December 5th, 2024]
- Machine learning-based prediction of antibiotic resistance in Mycobacterium tuberculosis clinical isolates from Uganda - BMC Infectious Diseases - December 5th, 2024 [December 5th, 2024]
- Interdisciplinary Team Needed to Apply Machine Learning in Epilepsy Surgery: Lara Jehi, MD, MHCDS - Neurology Live - December 5th, 2024 [December 5th, 2024]
- A multimodal machine learning model for the stratification of breast cancer risk - Nature.com - December 5th, 2024 [December 5th, 2024]
- Machine learning based intrusion detection framework for detecting security attacks in internet of things - Nature.com - December 5th, 2024 [December 5th, 2024]
- Machine learning evaluation of a hypertension screening program in a university workforce over five years - Nature.com - December 5th, 2024 [December 5th, 2024]
- Vaultree Introduces VENum Stack: Combining the Power of Machine Learning and Encrypted Data Processing for Secure Innovation - PR Newswire - December 5th, 2024 [December 5th, 2024]
- Direct simulation and machine learning structure identification unravel soft martensitic transformation and twinning dynamics - pnas.org - December 5th, 2024 [December 5th, 2024]
- AI and Machine Learning - Maryland to use AI technology to manage traffic flow - SmartCitiesWorld - December 5th, 2024 [December 5th, 2024]
- Researchers make machine learning breakthrough in lithium-ion tech here's how it could make aging batteries safer - Yahoo! Voices - December 5th, 2024 [December 5th, 2024]
- Integrating IoT and machine learning: Benefits and use cases - TechTarget - December 5th, 2024 [December 5th, 2024]
- Landsat asks industry for artificial intelligence (AI) and machine learning for satellite operations - Military & Aerospace Electronics - December 5th, 2024 [December 5th, 2024]
- Machine learning optimized efficient graphene-based ultra-broadband solar absorber for solar thermal applications - Nature.com - December 5th, 2024 [December 5th, 2024]
- Polymathic AI Releases The Well: 15TB of Machine Learning Datasets Containing Numerical Simulations of a Wide Variety of Spatiotemporal Physical... - December 5th, 2024 [December 5th, 2024]
- Prediction of preterm birth using machine learning: a comprehensive analysis based on large-scale preschool children survey data in Shenzhen of China... - December 5th, 2024 [December 5th, 2024]
- Application of machine learning algorithms to identify serological predictors of COVID-19 severity and outcomes - Nature.com - November 30th, 2024 [November 30th, 2024]
- Predicting the time to get back to work using statistical models and machine learning approaches - BMC Medical Research Methodology - November 30th, 2024 [November 30th, 2024]
- AI and Machine Learning - US releases recommendations for use of AI in critical infrastructure - SmartCitiesWorld - November 30th, 2024 [November 30th, 2024]
- Machine learning-based diagnostic model for stroke in non-neurological intensive care unit patients with acute neurological manifestations -... - November 28th, 2024 [November 28th, 2024]
- Analysis of four long non-coding RNAs for hepatocellular carcinoma screening and prognosis by the aid of machine learning techniques - Nature.com - November 28th, 2024 [November 28th, 2024]
- Evaluation and prediction of the physical properties and quality of Jatob-do-Cerrado seeds processed and stored in different conditions using machine... - November 28th, 2024 [November 28th, 2024]
- Researchers use fitness tracker data and machine learning to detect bipolar disorder mood swings - Medical Xpress - November 28th, 2024 [November 28th, 2024]
- Advances in AI and Machine Learning for Nuclear Applications - Frontiers - November 28th, 2024 [November 28th, 2024]
- Researchers make machine learning breakthrough in lithium-ion tech here's how it could make aging batteries safer - The Cool Down - November 28th, 2024 [November 28th, 2024]
- Svitla Systems Publishes Results of the Study on Machine Learning's Role in Credit Scoring - Newsfile - November 28th, 2024 [November 28th, 2024]
- Predicting poor performance on cognitive tests among older adults using wearable device data and machine learning: a feasibility study - Nature.com - November 28th, 2024 [November 28th, 2024]
- Quantum Machine Learning: Bridging the Future of AI and Quantum Computing - TechBullion - November 28th, 2024 [November 28th, 2024]
- AI and machine learning trends in healthcare - Healthcare Leader - November 28th, 2024 [November 28th, 2024]
- Identification of biomarkers for the diagnosis in colorectal polyps and metabolic dysfunction-associated steatohepatitis (MASH) by bioinformatics... - November 28th, 2024 [November 28th, 2024]
- Revolutionizing Business Systems with Machine Learning: Practical Innovations for the Modern Era - TechBullion - November 28th, 2024 [November 28th, 2024]
- Can AI improve plant-based meats? Using mechanical testing and machine learning to mimic the sensory experience - Phys.org - November 16th, 2024 [November 16th, 2024]
- Machine Learning Reveals Impact of Microbial Load on Gut Health and Disease - Genetic Engineering & Biotechnology News - November 16th, 2024 [November 16th, 2024]
- Machine learning for predicting in-hospital mortality in elderly patients with heart failure combined with hypertension: a multicenter retrospective... - November 16th, 2024 [November 16th, 2024]
- Apple Researchers Propose Cut Cross-Entropy (CCE): A Machine Learning Method that Computes the Cross-Entropy Loss without Materializing the Logits for... - November 16th, 2024 [November 16th, 2024]
- Exploring electron-beam induced modifications of materials with machine-learning assisted high temporal resolution electron microscopy - Nature.com - November 16th, 2024 [November 16th, 2024]
- Facilitated the discovery of new / Co-based superalloys by combining first-principles and machine learning - Nature.com - November 16th, 2024 [November 16th, 2024]
- Thwarting Phishing Attacks with Predictive Analytics and Machine Learning in 2024 - Petri.com - November 16th, 2024 [November 16th, 2024]
- Optoelectronic performance prediction of HgCdTe homojunction photodetector in long wave infrared spectral region using traditional simulations and... - November 16th, 2024 [November 16th, 2024]
- A new approach for sex prediction by evaluating mandibular arch and canine dimensions with machine-learning classifiers and intraoral scanners (a... - November 16th, 2024 [November 16th, 2024]
- AI and Machine Learning - Google and National League of Cities develop AI toolkit - SmartCitiesWorld - November 16th, 2024 [November 16th, 2024]
- Machine learning for the physics of climate - Nature.com - November 14th, 2024 [November 14th, 2024]
- Red Hat acquires tech to lower the cost of machine learning - ComputerWeekly.com - November 14th, 2024 [November 14th, 2024]
- SUU Professor Receives Grant to Develop Machine Learning Certificate - Southern Utah University - November 14th, 2024 [November 14th, 2024]
- Research on the timing for subsequent water flooding in Alkali-Surfactant-Polymer flooding in Daqing Oilfield based on automated machine learning -... - November 14th, 2024 [November 14th, 2024]
- SNPs and blood inflammatory marker featured machine learning for predicting the efficacy of fluorouracil-based chemotherapy in colorectal cancer -... - November 14th, 2024 [November 14th, 2024]
- Speech production under stress for machine learning: multimodal dataset of 79 cases and 8 signals - Nature.com - November 14th, 2024 [November 14th, 2024]
- Xbox Series X Machine Learning Hardware Has Some Use Cases, But Microsoft Never Showed Interest in Doing Anything With It - Wccftech - November 14th, 2024 [November 14th, 2024]
- Get An Introduction to Optimization: With Applications to Machine Learning, 5th Edition for FREE and save $106! - BetaNews - November 14th, 2024 [November 14th, 2024]
- New Study Uses fMRI and Machine Learning to Explore Brain Function - AZoRobotics - November 14th, 2024 [November 14th, 2024]
- Introduction to Machine Learning (ML) | by Venkat | Nov, 2024 - Medium - November 14th, 2024 [November 14th, 2024]